Don't work with the Makefile's directly, if you really need to do changes, please do it in the Makefile.am and rerun ./bootstrap from C::B root-folder.
All other changes are only locally and will be overwritten sooner or later.
By the way, it works here without any problems (fedora 16 64-bit).
If I find the time, I will prepare a repo for fedora 16 and upload nightly builds from time to time.