I'm using autotools for my projects, so I tick the "This is a custom makefile" box and it all works fine until I get a compile error or warning.
I've got all my files in a sub directory of the root project directory. Because of the way autotools sets things up, gcc reports errors as occuring in filename.h or filename.cpp, but codeblocks can't find them because it expects them in src/filename.h, does anyone know if there is a way to let codeblocks know about the path difference?