I attached my latest modified version of the AVR template for review. Changes are below as many as I can remember them:
-Added programmer and debugger options to use with the Tools+ or tools plugins on an extra options page.
-Added generation of separate fuse (high, low, extended), signature and lock bytes.
-Changed the project type from 'console' to 'native'.
-I find the '.elf.eep, elf.hex etc...' like file extensions confusing so I modified the template to generate '.elf, .eep, .hex etc...' instead.
That's all I can remember.
I'm submitting this patch and also the 'MCS51' template patch to the patch tracker if appropriate.
Edit: Also submitted to the patch tracker.