If you 're in a hurry, create src/plugins/contrib/Makefile.am and put the following lines in it:
SUBDIRS = codestat profiler
Just delete it before running cvs update later (or it 'll complain)...
ok, it's compiling here with this dirty fix. However it needed some extra tweaks.
After adding the Makefile with SUBDIRS, like you said, it complains about two other files,
but i made these with touch
touch src/plugins/contrib/profiler/Makefile.in
touch src/plugins/contrib/profiler/resources/Makefile.in
now configure went alright, and i'm running make as we... uhh.. write. :)
-st3vie